PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0745.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 206aa    MW: 22614.4 Da    PI: 9.8323
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0745.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.2e-19654153
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                         ++++GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a+  +
  Kaladp0048s0745.1.p  6 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDQAAVLM 54
                         59*******9.**********8.....334*********************9765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.13E-33666No hitNo description
SuperFamilySSF541711.5E-20765IPR016177DNA-binding domain
PROSITE profilePS5103221.865764IPR001471AP2/ERF domain
PfamPF008477.9E-12751IPR001471AP2/ERF domain
SMARTSM003803.4E-39770IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.7E-33764IPR001471AP2/ERF domain
PRINTSPR003671.2E-10819IPR001471AP2/ERF domain
PRINTSPR003671.2E-103046IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MVQGNKKFRG VRQRHWGSWV SEIRHPLLKR RVWLGTFETA EEAARAYDQA AVLMSGRNAK  60
TNFPIDQTDD QISTDSPNGK NCVSRSSSSS NTTLSEILHA KFKKCTKAPS PSLTCLRLDT  120
EKSNIGVWQK RAGSRSEANW VMTVELGGVS RSTSYKAGVG VNKGSSGVGF GLEWKSADGN  180
VGDEMVKNDE ERIALQMIEE LLFSN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-17665464ATERF1
3gcc_A7e-17665464ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012458044.12e-82PREDICTED: ethylene-responsive transcription factor WIN1-like
SwissprotQ9XI333e-71WIN1_ARATH; Ethylene-responsive transcription factor WIN1
TrEMBLA0A0D2PLL92e-82A0A0D2PLL9_G
STRINGLOC_Os02g10760.12e-78(Oryza sativa Japonica Group)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.13e-61ERF family protein